Algorithms and software for stochastic simulation of biochemical reacting systems.

نویسندگان

  • Hong Li
  • Yang Cao
  • Linda R Petzold
  • Daniel T Gillespie
چکیده

Traditional deterministic approaches for simulation of chemically reacting systems fail to capture the randomness inherent in such systems at scales common in intracellular biochemical processes. In this manuscript, we briefly review the state of the art in discrete stochastic and multiscale algorithms for simulation of biochemical systems and we present the StochKit software toolkit.

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عنوان ژورنال:
  • Biotechnology progress

دوره 24 1  شماره 

صفحات  -

تاریخ انتشار 2008